Solutions

Organize data and analysis around a question

Choose built-in methods for expression, regulatory regions and variants. Teams with specialized methods can bring their existing Nextflow projects.

Dairy and microbial research

Make established analysis methods reusable

Import existing microbial Nextflow projects, manage samples and archive results. Specialized methods such as strain assembly and pan-genomics require an appropriate pipeline and data.

Import existing Nextflow projects
Manage samples and reference files
Reuse settings across batches
Archive research results

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Research institutions

From sequencing data to reusable results

Work with RNA-seq, ChIP-seq, ATAC-seq, methylation and spatial transcriptomics. Evaluate methods with public data, then reuse an analysis with your own samples.

Six built-in analysis types
Public data and your own samples
Editable personal pipelines
Reports linked to analysis records

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Medical research

An analysis foundation for genetic variation

Use Sarek for germline or somatic variant studies with WGS / WES data. Retain analysis inputs, parameters and outputs for your team to review and reuse.

Germline and somatic variants
WGS / WES data
Reference data and run settings
Download and reuse analysis results

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Data → analysis → reports → reuse

Follow the same path for your first run and your next study. Choose data, then review parameters and estimated Credits.

Find research data

Upload FASTQ files and sample details, or add public data to your analysis workspace.

Configure an analysis

Choose a pipeline for your question, match inputs, and review parameters.

Read progress and reports

Follow processing steps, then open reports and download result files.

Reuse with new samples

Keep the pipeline and parameters, choose new inputs, and run again.

Find research data

Upload FASTQ files and sample details, or add public data to your analysis workspace.

Configure an analysis

Choose a pipeline for your question, match inputs, and review parameters.

Read progress and reports

Follow processing steps, then open reports and download result files.

Reuse with new samples

Keep the pipeline and parameters, choose new inputs, and run again.

Data, analyses and reports in one workspace

Start with your next analysis

Choose a built-in analysis, add data, and review the run settings. Bring an existing Nextflow project through the import path.

Start an analysis